{
  "_id": "6a60b722c766cc6deb6aa2c7",
  "Package": "alternativeROC",
  "Type": "Package",
  "Title": "Biomarkers - Fast ROC Analysis",
  "Version": "1.0.5",
  "Date": "2026-07-22",
  "Authors@R": "c(\nperson(given = \"Gregoire\", family = \"Thomas\",\nrole = c(\"aut\", \"cre\"),\nemail = \"gregoire.thomas@SQU4RE.com\",\ncomment = c(ORCID = \"0000-0002-6247-9438\")),\nperson(given = \"Robin\", family = \"Tuytten\",\nrole = \"ctb\",\nemail = \"robin.tuytten@metabolomicdiagnostics.com\",\ncomment = c(ORCID = \"0000-0002-8734-7335\")),\nperson(given = \"Jef\", family = \"Moerman\", role = \"ctb\"),\nperson(\"Xavier\", \"Robin\", role = \"cph\",\ncomment = \"Co-author of delong.cpp from package pROC\"),\nperson(\"Stefan\", \"Siegert\", role = \"cph\",\ncomment = \"Co-author of delong.cpp from package pROC\")\n)",
  "Description": "Fast algorithms for the analysis of receiver operating\ncharacteristics curves (ROC curves) for biomarkers as described\nin Thomas et al. (2017) <doi:10.1186/s41512-017-0017-y> and\nThomas et al. (2023) <doi:10.1016/j.ajogmf.2023.101110>.",
  "License": "GPL-3",
  "Encoding": "UTF-8",
  "URL": "https://bitbucket.org/SQ4/alternativeROC",
  "ByteCompile": "true",
  "BugReports": "https://bitbucket.org/SQ4/alternativeROC/issues",
  "Config/roxygen2/version": "8.0.0",
  "Config/pak/sysreqs": "cmake make libicu-dev libuv1-dev",
  "Repository": "https://squ4reanalytics.r-universe.dev",
  "Date/Publication": "2026-07-22 11:32:39 UTC",
  "RemoteUrl": "https://bitbucket.org/sq4/alternativeroc",
  "RemoteRef": "HEAD",
  "RemoteSha": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
  "RemoteSubdir": "alternativeROC",
  "NeedsCompilation": "yes",
  "Packaged": {
    "Date": "2026-07-22 12:21:58 UTC",
    "User": "root"
  },
  "Author": "Gregoire Thomas [aut, cre] (ORCID:\n<https://orcid.org/0000-0002-6247-9438>),\nRobin Tuytten [ctb] (ORCID: <https://orcid.org/0000-0002-8734-7335>),\nJef Moerman [ctb],\nXavier Robin [cph] (Co-author of delong.cpp from package pROC),\nStefan Siegert [cph] (Co-author of delong.cpp from package pROC)",
  "Maintainer": "Gregoire Thomas <gregoire.thomas@SQU4RE.com>",
  "_user": "squ4reanalytics",
  "_type": "src",
  "_file": "alternativeROC_1.0.5.tar.gz",
  "_fileid": "https://r2.ropensci.org/f434900aa2142d1eddf9cc997a514b7980b125262a932857f3074a9fe6391139",
  "_filesize": 132197,
  "_sha256": "f434900aa2142d1eddf9cc997a514b7980b125262a932857f3074a9fe6391139",
  "_expires": "2026-10-30T12:27:12.000Z",
  "_created": "2026-07-22T12:21:58.000Z",
  "_published": "2026-07-22T12:27:14.601Z",
  "_jobs": [
    {
      "job": 88920696988,
      "time": 161,
      "config": "linux-devel-arm64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8529295975"
    },
    {
      "job": 88920696964,
      "time": 177,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8529303105"
    },
    {
      "job": 88920697024,
      "time": 159,
      "config": "linux-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529295399"
    },
    {
      "job": 88920697058,
      "time": 191,
      "config": "linux-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529309286"
    },
    {
      "job": 88920696986,
      "time": 135,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8529283710"
    },
    {
      "job": 88920697032,
      "time": 230,
      "config": "macos-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8529327005"
    },
    {
      "job": 88920696982,
      "time": 136,
      "config": "macos-release-arm64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529284498"
    },
    {
      "job": 88920697042,
      "time": 264,
      "config": "macos-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529343361"
    },
    {
      "job": 88919677347,
      "time": 277,
      "config": "source",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529221058"
    },
    {
      "job": 88920696909,
      "time": 132,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "8529282444"
    },
    {
      "job": 88920696972,
      "time": 137,
      "config": "windows-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "8529285311"
    },
    {
      "job": 88920696920,
      "time": 140,
      "config": "windows-oldrel-x86_64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "8529285840"
    },
    {
      "job": 88920696889,
      "time": 156,
      "config": "windows-release-x86_64",
      "r": "4.6.1",
      "check": "OK",
      "artifact": "8529294535"
    }
  ],
  "_host": "GitHub-Actions",
  "_buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244",
  "_status": "success",
  "_upstream": "https://bitbucket.org/sq4/alternativeroc",
  "_commit": {
    "id": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
    "author": "8qube <gregoire@8qu.be>",
    "committer": "8qube <gregoire@8qu.be>",
    "message": "Version 1.0.5\n",
    "time": 1784719959
  },
  "_maintainer": {
    "name": "Gregoire Thomas",
    "email": "gregoire.thomas@squ4re.com",
    "login": "squ4reanalytics",
    "description": "",
    "uuid": 122602947,
    "orcid": "0000-0002-6247-9438"
  },
  "_distro": "resolute",
  "_registered": true,
  "_dependencies": [
    {
      "package": "R",
      "version": ">= 4.0.0",
      "role": "Depends"
    },
    {
      "package": "stats",
      "role": "Depends"
    },
    {
      "package": "utils",
      "role": "Depends"
    },
    {
      "package": "graphics",
      "role": "Depends"
    },
    {
      "package": "pROC",
      "role": "Depends"
    },
    {
      "package": "plyr",
      "role": "Depends"
    },
    {
      "package": "sn",
      "role": "Depends"
    },
    {
      "package": "Hmisc",
      "role": "Depends"
    },
    {
      "package": "Rcpp",
      "role": "LinkingTo"
    },
    {
      "package": "Rcpp",
      "version": ">= 1.0.9",
      "role": "Imports"
    },
    {
      "package": "roxygen2",
      "version": ">= 3.1.0",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "role": "Suggests"
    }
  ],
  "_owner": "bitbucket-sq4",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2025-31",
      "n": 1
    },
    {
      "week": "2025-44",
      "n": 2
    },
    {
      "week": "2025-48",
      "n": 1
    },
    {
      "week": "2026-30",
      "n": 1
    }
  ],
  "_tags": [],
  "_userbio": {
    "uuid": 122602947,
    "type": "user",
    "name": "SQU4RE",
    "followers": 0
  },
  "_downloads": {
    "count": 242,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/alternativeROC"
  },
  "_devurl": "https://bitbucket.org/sq4/alternativeroc",
  "_searchresults": 7,
  "_topics": [
    "cpp"
  ],
  "_rbuild": "4.6.1",
  "_assets": [
    "extra/alternativeROC.html",
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://bitbucket.org/sq4/alternativeroc",
  "_realowner": "squ4reanalytics",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.0.12",
      "date": "2025-06-11"
    },
    {
      "version": "1.0.0",
      "date": "2025-06-29"
    },
    {
      "version": "1.0.1",
      "date": "2025-08-19"
    },
    {
      "version": "1.0.3",
      "date": "2025-10-30"
    },
    {
      "version": "1.0.4",
      "date": "2025-11-24"
    },
    {
      "version": "1.0.5",
      "date": "2026-07-22"
    }
  ],
  "_exports": [
    "cinpv",
    "cippv",
    "npv",
    "npv.seatsp",
    "npv.spatse",
    "p.auc",
    "plotROC",
    "ppv",
    "ppv.seatsp",
    "ppv.spatse",
    "pvs",
    "rocperf",
    "rocthreshold"
  ],
  "_help": [
    {
      "page": "alternativeROC",
      "title": "alternativeROC",
      "topics": [
        "alternativeROC"
      ]
    },
    {
      "page": "alternativeROC-common-args",
      "title": "Arguments used across the functions of the alternativeROC package.",
      "topics": [
        "alternativeROC-common-args",
        "dummy"
      ]
    },
    {
      "page": "cinpv",
      "title": "Diagnostic performance: Confidence interval for negative predictive value",
      "topics": [
        "cinpv"
      ]
    },
    {
      "page": "cippv",
      "title": "Diagnostic performance: Confidence interval for positive predictive value",
      "topics": [
        "cippv"
      ]
    },
    {
      "page": "npv",
      "title": "Diagnostic performance: Negative predictive values from a ROC curve",
      "topics": [
        "npv"
      ]
    },
    {
      "page": "npv.seatsp",
      "title": "Diagnostic performance: Sensitivity from specificity, NPV and prevalence",
      "topics": [
        "npv.seatsp"
      ]
    },
    {
      "page": "npv.spatse",
      "title": "Diagnostic performance: Specificity from sensitivity, NPV and prevalence",
      "topics": [
        "npv.spatse"
      ]
    },
    {
      "page": "p.auc",
      "title": "p[AUC=0.5]",
      "topics": [
        "p.auc"
      ]
    },
    {
      "page": "plotROC",
      "title": "Diagnostic performance: Plot ROC curve",
      "topics": [
        "plotROC"
      ]
    },
    {
      "page": "ppv",
      "title": "Diagnostic performance: Positive predictive values from a ROC curve",
      "topics": [
        "ppv"
      ]
    },
    {
      "page": "ppv.seatsp",
      "title": "Diagnostic performance: Sensitivity from specificity, PPV and prevalence",
      "topics": [
        "ppv.seatsp"
      ]
    },
    {
      "page": "ppv.spatse",
      "title": "Diagnostic performance: Specificity from sensitivity, PPV and prevalence",
      "topics": [
        "ppv.spatse"
      ]
    },
    {
      "page": "pvs",
      "title": "Diagnostic performance: Predictive values from a ROC curve",
      "topics": [
        "pvs"
      ]
    },
    {
      "page": "rocperf",
      "title": "ROC curve performances",
      "topics": [
        "rocperf"
      ]
    },
    {
      "page": "rocthreshold",
      "title": "rocthreshold",
      "topics": [
        "rocthreshold"
      ]
    }
  ],
  "_readme": "https://bitbucket.org/sq4/alternativeroc/raw/HEAD/README.md",
  "_rundeps": [
    "backports",
    "base64enc",
    "bslib",
    "cachem",
    "checkmate",
    "cli",
    "cluster",
    "colorspace",
    "cpp11",
    "data.table",
    "digest",
    "evaluate",
    "farver",
    "fastmap",
    "fontawesome",
    "foreign",
    "Formula",
    "fs",
    "ggplot2",
    "glue",
    "gridExtra",
    "gtable",
    "highr",
    "Hmisc",
    "htmlTable",
    "htmltools",
    "htmlwidgets",
    "isoband",
    "jquerylib",
    "jsonlite",
    "knitr",
    "labeling",
    "lattice",
    "lifecycle",
    "magrittr",
    "MASS",
    "Matrix",
    "MatrixModels",
    "memoise",
    "mime",
    "mnormt",
    "nnet",
    "numDeriv",
    "plyr",
    "pROC",
    "quantreg",
    "R6",
    "rappdirs",
    "RColorBrewer",
    "Rcpp",
    "rlang",
    "rmarkdown",
    "rpart",
    "rstudioapi",
    "S7",
    "sass",
    "scales",
    "sn",
    "SparseM",
    "stringi",
    "stringr",
    "survival",
    "tinytex",
    "vctrs",
    "viridisLite",
    "withr",
    "xfun",
    "yaml"
  ],
  "_sysdeps": [
    {
      "shlib": "libstdc++",
      "package": "libstdc++6",
      "source": "gcc",
      "version": "16-20260322-1ubuntu1",
      "name": "c++",
      "homepage": "http://gcc.gnu.org/",
      "description": "GNU Standard C++ Library v3"
    }
  ],
  "_score": 3.3010299956639813,
  "_indexed": true,
  "_nocasepkg": "alternativeroc",
  "_universes": [
    "squ4reanalytics",
    "bitbucket-sq4"
  ],
  "_previous": "1.0.4",
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-07-22T12:24:25.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/c423f9125328f34badc8ca20f9177e8700e511fe7619f807a1395f0cea8c2c5d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-07-22T12:24:32.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/f35e0b38e23aa1b1c29db538f13c738032c8eb90b0b3bf13662f9178eab5afa5",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-07-22T12:24:24.000Z",
      "distro": "resolute",
      "arch": "aarch64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/f4026eb18ba1341967b80f85613a98c52f197c2609338a5eb0d77565bd13aa36",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.1",
      "os": "linux",
      "version": "1.0.5",
      "date": "2026-07-22T12:24:46.000Z",
      "distro": "resolute",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/fe832b3a868c819304387b40a4e0b8c95adb6d4947a0c97e80348c610660d67b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-07-22T12:23:57.000Z",
      "arch": "aarch64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/cfbf8f95b468033e4b3540929973e37d4aa9c57a0e65842f9a86a853578d02b9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-07-22T12:25:03.000Z",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/816ead5c98cdc876be2d23150614ed7398823b198edfb6a8bf82a18c9c7f7d75",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-07-22T12:23:53.000Z",
      "arch": "aarch64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/a41acc9c29ffcffd99cc41db701f156cd2d2d693c1ce013b1c071d3ac54e736f",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.1",
      "os": "mac",
      "version": "1.0.5",
      "date": "2026-07-22T12:25:34.000Z",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/51f68889dbd5aa0445315575d197993d21df50be724e63e4d341a4c100551629",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "1.0.5",
      "date": "2026-07-22T12:24:34.000Z",
      "arch": "emscripten",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/91d1195a96f2294925a24f570d5290c4d67be58ec0be67820ef6d89621cd4735",
      "status": "success",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-07-22T12:23:22.000Z",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/e11a81ae1969a49f37e97b37065dceb5d5339bbe2ec9770208b3207d69dd190d",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-07-22T12:23:25.000Z",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/4c103050ffdffd28b79fa0ad6f0842534524d5df63eb972abf68abc46e7c66e9",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    },
    {
      "r": "4.6.1",
      "os": "win",
      "version": "1.0.5",
      "date": "2026-07-22T12:23:42.000Z",
      "arch": "x86_64",
      "commit": "7d77475ee06af4f22e4758f05d37664f5c8d9da2",
      "fileid": "https://r2.ropensci.org/acf73793fde3d7b520c04e2fca2d07e093388d96db6af1c57236c562f50d94f1",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/squ4reanalytics/actions/runs/29919020244"
    }
  ]
}